Software

1. ViroProfiler: a containerized bioinformatics pipeline for viral metagenomic data analysis

2. TPD: a computational pipeline for therapeutic phage discovery from prophages

3. TMKit: a Python interface for computational analysis of transmembrane proteins

Database

1. TCMSP: a database of systems pharmacology for drug discovery from herbal medicines

2. DeepsmirUD_web: a database of predicted small molecule-mediated regulatory effects on miRNA expression